CDS
| Accession Number | TCMCG057C57475 |
| gbkey | CDS |
| Protein Id | XP_018463669.1 |
| Location | complement(join(3916..4244,4330..4444,4545..4702,4794..4894,4992..5140,5215..5365,5740..5893,5959..6058,6124..6354)) |
| Gene | LOC108834847 |
| GeneID | 108834847 |
| Organism | Raphanus sativus |
Protein
| Length | 495aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018608167.1 |
| Definition | PREDICTED: signal recognition particle 54 kDa protein 3 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein) |
| KEGG_TC | 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 |
| KEGG_Module |
M00335
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko02044 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03106
[VIEW IN KEGG] |
| EC |
3.6.5.4
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko02024
[VIEW IN KEGG] ko03060 [VIEW IN KEGG] ko03070 [VIEW IN KEGG] map02024 [VIEW IN KEGG] map03060 [VIEW IN KEGG] map03070 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGTTTTAGCGGAGCTCGGCGGGCAGATTGCCAGCGCCTTACAGAAGATGAGCAATTCGACGATTATCGACGAGAAGGCTCTTAATGAGTGTTTGAAAGAGATCACTCGCGCTCTTCTCCACTCCGATGTCTCTTTCCCACTTGTGAGGGAGATGCAGAACAACATCAAGAAGATCGTCAACCTCGAGGAGCTAGCAGCTGGTCACAACAAGCGACGGATCATTGAGCAGGCAATCTTTAGTGAACTGTGTAAGATGTTAGACCCAGGAAAGCCTGCATTTGCACCCAAAAAGGCTAAACCAAGTGTAGTTATGTTCGTTGGGTTACAAGGTGCTGGTAAGACCACAACGTGTACCAAGTATGCTTATTATCATCAGAAGAAAGGGTACAAGCCTGCTCTAGTCTGTGCCGATACTTTCAGAGCTGGTGCTTTTGATCAGCTCAAACAGAATGCCACCAAGGCTAGGATCCCTTTTTATGGAAGCTACACGGAATCAGATCCTGTGAAAATTGCTGTTGAGGGAGTTGATACCTTTAAGAAAGAAAACTGTGATCTTATTATTGTTGACACCAGTGGACGCCATAAGCAAGAAGCTACTCTTTTTGAAGAAATGCGTCAAGTTGCTGAAGCAACAAAACCAGATCTTGTTATATTTGTCATGGACAGCAGTATTGGTCAAGCTGCATTTGACCAAGCTCAAGCATTTAAGCAAAGTGTTGCTGTGGGAGCTGTGATTATCACTAAGATGGACGGCCATGCCAAGGGTGGTGGTGCTCTTAGCGCTGTTGCAGCTACAAAGAGTCCTGTGATATTCATCGGAACAGGAGAGCATATGGATGAGTTTGAAGTGTTTGACGTCAAACCATTTGTCAGCCGTCTCTTAGGAATGGGTGACTGGTCTGGATTCGTGGATAAACTACAAGATGTGGTACCTAAAGATCAACAGCCTGAACTTCTGGAAAAGCTCTCTCAGGGTACCTTCACATTGAGAATTATGTACGACCAGTTCCAGAACATACTGAACATGGGTCCACTGAAGGAGGTTTTCTCAATGCTTCCTGGAGGTGCTGCTGATATGATGCCGAAAGGACATGAGAAAGAAAGCCAAGCCAAGGTAAAGCGATACATGACAATGATGGATTCTATGACAAACGAAGAACTGGACAGCTCGAACCCGAAGGTGTTTAATGAGTCAAGGATGATGAGGATAGCGAGAGGGTCAGGGAGGCTTGTAAGAGAAGTGATGGAGATGTTGGAAGAGTACAAGAGGCTAGCAAAGATATGGAGCAAGATGAAAGGGCTCAAGATCCCAAAGAGTGGGGACATGAGCGCACTGTCGAGAAACATGAACGCTCAGCACATGAGCAAGGTCCTCCCTCCTCAGATGCTCAAGCAGATTGGTGGCATGGGCGGTCTACAGAGTCTCATGAAACAGATGGGCTCGGGCAAGGATATGATGGGAATGTTCGGCGGCAAAGACAAATAG |
| Protein: MVLAELGGQIASALQKMSNSTIIDEKALNECLKEITRALLHSDVSFPLVREMQNNIKKIVNLEELAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEATLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQDVVPKDQQPELLEKLSQGTFTLRIMYDQFQNILNMGPLKEVFSMLPGGAADMMPKGHEKESQAKVKRYMTMMDSMTNEELDSSNPKVFNESRMMRIARGSGRLVREVMEMLEEYKRLAKIWSKMKGLKIPKSGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQMGSGKDMMGMFGGKDK |